Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BEN83_03020 | BEN83_04615 | GCA_001243975_01594 | GCA_001243975_01855 | Unannotated protein. | Unannotated protein. | 0.903 |
BEN83_03020 | BEN83_05600 | GCA_001243975_01594 | GCA_001243975_02033 | Unannotated protein. | Unannotated protein; Belongs to the SEDS family. | 0.726 |
BEN83_03020 | BEN83_05760 | GCA_001243975_01594 | GCA_001243975_02064 | Unannotated protein. | Unannotated protein. | 0.524 |
BEN83_03020 | BEN83_06765 | GCA_001243975_01594 | GCA_001243975_00639 | Unannotated protein. | Unannotated protein. | 0.640 |
BEN83_03020 | mraY | GCA_001243975_01594 | GCA_001243975_02062 | Unannotated protein. | Unannotated protein; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.623 |
BEN83_03020 | murC | GCA_001243975_01594 | GCA_001243975_00512 | Unannotated protein. | Unannotated protein; Cell wall formation; Belongs to the MurCDEF family. | 0.731 |
BEN83_03020 | murD | GCA_001243975_01594 | GCA_001243975_02061 | Unannotated protein. | Unannotated protein; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.570 |
BEN83_03020 | murF | GCA_001243975_01594 | GCA_001243975_00447 | Unannotated protein. | Unannotated protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.622 |
BEN83_03020 | murG | GCA_001243975_01594 | GCA_001243975_02060 | Unannotated protein. | Unannotated protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.527 |
BEN83_04615 | BEN83_03020 | GCA_001243975_01855 | GCA_001243975_01594 | Unannotated protein. | Unannotated protein. | 0.903 |
BEN83_04615 | BEN83_05600 | GCA_001243975_01855 | GCA_001243975_02033 | Unannotated protein. | Unannotated protein; Belongs to the SEDS family. | 0.731 |
BEN83_04615 | BEN83_05760 | GCA_001243975_01855 | GCA_001243975_02064 | Unannotated protein. | Unannotated protein. | 0.525 |
BEN83_04615 | BEN83_06765 | GCA_001243975_01855 | GCA_001243975_00639 | Unannotated protein. | Unannotated protein. | 0.627 |
BEN83_04615 | mraY | GCA_001243975_01855 | GCA_001243975_02062 | Unannotated protein. | Unannotated protein; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.599 |
BEN83_04615 | murC | GCA_001243975_01855 | GCA_001243975_00512 | Unannotated protein. | Unannotated protein; Cell wall formation; Belongs to the MurCDEF family. | 0.720 |
BEN83_04615 | murD | GCA_001243975_01855 | GCA_001243975_02061 | Unannotated protein. | Unannotated protein; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.542 |
BEN83_04615 | murF | GCA_001243975_01855 | GCA_001243975_00447 | Unannotated protein. | Unannotated protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.616 |
BEN83_04615 | murG | GCA_001243975_01855 | GCA_001243975_02060 | Unannotated protein. | Unannotated protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.517 |
BEN83_05600 | BEN83_03020 | GCA_001243975_02033 | GCA_001243975_01594 | Unannotated protein; Belongs to the SEDS family. | Unannotated protein. | 0.726 |
BEN83_05600 | BEN83_04615 | GCA_001243975_02033 | GCA_001243975_01855 | Unannotated protein; Belongs to the SEDS family. | Unannotated protein. | 0.731 |
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