STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER45009.1Spore germination protein. (448 aa)    
Predicted Functional Partners:
SER45036.1
N-acetylmuramoyl-L-alanine amidase.
 
  
 0.965
SER46761.1
Stage II sporulation protein M; Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane.
  
     0.772
SER63537.1
Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR.
  
     0.769
SES40862.1
Stage II sporulation protein E.
  
     0.762
SER49255.1
Stage III sporulation protein AC.
  
     0.760
SES40874.1
Ca-activated chloride channel family protein.
  
     0.748
SER49189.1
Stage III sporulation protein AE.
  
     0.744
SER91271.1
Germination protein M.
  
     0.740
SER49803.1
Protein YqhG of unknown function.
  
     0.733
SER49158.1
Stage III sporulation protein AF.
  
     0.714
Your Current Organism:
Salipaludibacillus aurantiacus
NCBI taxonomy Id: 1601833
Other names: Bacillus sp. S12(2015), Bacillus sp. s9, KCTC 33633, LMG 28644, LMG:28644, S. aurantiacus, Salipaludibacillus aurantiacus Sultanpuram and Mothe 2016, strain S9
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