STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER73076.1Stage V sporulation protein B. (516 aa)    
Predicted Functional Partners:
SES36301.1
Outer membrane lipoprotein-sorting protein.
  
     0.747
SER71007.1
Stage II sporulation protein P.
  
   
 0.742
SER91890.1
Stage VI sporulation protein D.
  
    0.730
SES40862.1
Stage II sporulation protein E.
  
   
 0.729
SER49803.1
Protein YqhG of unknown function.
  
     0.724
SER63912.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
  
  
 0.718
SER91271.1
Germination protein M.
  
     0.715
SER59050.1
Spore coat protein E.
  
    0.711
SER72784.1
Prespore-specific regulator.
  
     0.703
SER49189.1
Stage III sporulation protein AE.
  
  
 0.702
Your Current Organism:
Salipaludibacillus aurantiacus
NCBI taxonomy Id: 1601833
Other names: Bacillus sp. S12(2015), Bacillus sp. s9, KCTC 33633, LMG 28644, LMG:28644, S. aurantiacus, Salipaludibacillus aurantiacus Sultanpuram and Mothe 2016, strain S9
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