STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES21788.1Heat induced stress protein YflT. (184 aa)    
Predicted Functional Partners:
SES31407.1
Conserved domain-containing protein.
 
     0.919
SES14692.1
Protease I.
   
    0.768
SES32283.1
rsbT co-antagonist protein RsbR.
  
    0.726
SES36217.1
RNA polymerase sigma-B factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
  
 0.687
rsbW
Serine/threonine-protein kinase RsbW; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B).
   
    0.686
SES36679.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
   
  
 0.653
SES15593.1
Heat induced stress protein YflT.
  
  
 0.645
SES41612.1
Heat induced stress protein YflT.
  
  
 0.627
SER85532.1
Hypothetical protein.
  
    0.613
SES22184.1
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
  
    0.593
Your Current Organism:
Salipaludibacillus aurantiacus
NCBI taxonomy Id: 1601833
Other names: Bacillus sp. S12(2015), Bacillus sp. s9, KCTC 33633, LMG 28644, LMG:28644, S. aurantiacus, Salipaludibacillus aurantiacus Sultanpuram and Mothe 2016, strain S9
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.