STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0S6XH88WD_REPEATS_REGION domain-containing protein. (370 aa)    
Predicted Functional Partners:
A0A0S6X2E0
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.998
A0A0S6XID8
WD_REPEATS_REGION domain-containing protein.
  
 
 0.998
A0A0S6X9B2
YTH domain-containing protein.
    
 0.899
A0A0S6XQV2
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
 
  
  0.885
A0A0S6XD93
HORMA domain-containing protein.
   
 0.834
A0A0S6XCH2
Uncharacterized protein.
   
 0.823
A0A0S6XCJ7
TFIID_20kDa domain-containing protein.
   
 0.822
A0A0S6XDX9
TAF domain-containing protein.
    
 0.822
A0A0S6XNI9
Uncharacterized protein.
    
 0.822
A0A0S6XGW9
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.821
Your Current Organism:
fungal sp. No11243
NCBI taxonomy Id: 1603295
Other names: f. sp. No.11243, fungal sp. No.11243
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