STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0S6XJX9Uncharacterized protein. (50 aa)    
Predicted Functional Partners:
A0A0C9LM53
Uncharacterized protein.
   
 0.977
A0A0S6XDT3
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
   
 0.976
A0A0S6XPQ6
Uncharacterized protein.
    
 0.976
A0A0S6XEF7
Uncharacterized protein.
   
 0.975
A0A0S6XIY3
Helicase ATP-binding domain-containing protein.
    
 0.972
A0A0S6X8V6
RING-type domain-containing protein.
    
 0.971
A0A0S6XMC8
Uncharacterized protein.
    
 0.967
A0A0S6XNM8
HTH TFE/IIEalpha-type domain-containing protein.
   
 0.967
A0A0C9M316
TFIIB-type domain-containing protein.
    
 0.966
A0A0S6XDZ2
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.965
Your Current Organism:
fungal sp. No11243
NCBI taxonomy Id: 1603295
Other names: f. sp. No.11243, fungal sp. No.11243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.