STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC18060.1Restriction endonuclease S subunit. (351 aa)    
Predicted Functional Partners:
ALC16747.1
Type I restriction-modification system, DNA methylase subunit.
 
 
 0.877
ALC17792.1
Type I restriction-modification system, DNA methylase subunit.
 
 
 0.864
ALC18063.1
Type I restriction-modification system, DNA methylase subunit.
 
 
 0.848
ALC16377.1
Type I restriction-modification system, DNA methylase subunit.
  
 
 0.806
ALC16380.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
  
 0.754
ALC16751.1
Type I site-specific restriction endonuclease, part of a restriction-modification system.
 
 
 0.640
ALC17794.1
Type I site-specific restriction endonuclease; Part of a restriction-modification system.
 
 
 0.606
ALC16748.1
Cytochrome c biogenesis protein CycH.
  
    0.567
ALC18061.1
Transposase.
       0.554
ALC15825.1
Hypothetical protein.
  
    0.510
Your Current Organism:
Desulfuromonas soudanensis
NCBI taxonomy Id: 1603606
Other names: D. soudanensis, Desulfuromonas sp. WTL, strain WTL
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