STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPL69305.1Transposase. (397 aa)    
Predicted Functional Partners:
KPL68431.1
Hypothetical protein.
   
 0.954
KPL69304.1
Integrase.
 
     0.946
KPL68333.1
Histidine kinase.
   
 0.828
KPL68297.1
Hypothetical protein.
    
 0.791
KPL68478.1
Integrase; Belongs to the 'phage' integrase family.
 
     0.772
cysC
Adenylyltransferase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
   
 
 0.745
KPL67904.1
Histidine kinase.
  
 0.710
KPL67814.1
Hypothetical protein.
    
 0.637
KPL66772.1
Alcohol dehydrogenase.
  
 
 0.622
KPL66929.1
Quinohemoprotein alcohol dehydrogenase.
  
 
 0.622
Your Current Organism:
Erythrobacter sp. SG611L
NCBI taxonomy Id: 1603897
Other names: E. sp. SG61-1L, Erythrobacter sp. SG61-1L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.