STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ06263.1Bacteriocin helveticin-J. (312 aa)    
Predicted Functional Partners:
ADZ07606.1
V-type sodium ATP synthase subunit.
  
     0.764
ADZ06262.1
Helveticin ORF 2.
       0.709
ADZ06396.1
Hypothetical protein.
  
     0.690
ADZ07875.1
Hypothetical protein.
  
     0.684
ADZ07693.1
COG1765 Predicted redox protein, regulator of disulfide bond formation.
  
     0.646
ADZ06460.1
COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
     0.618
ADZ06373.1
Glucan modification protein; COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily.
 
     0.573
ADZ06965.1
COG2891 Cell shape-determining protein.
  
     0.550
ADZ06264.1
Hypothetical protein.
       0.545
ADZ06594.1
PrtP precursor; COG1404 Subtilisin-like serine proteases.
  
     0.529
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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