STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ06313.1Oxidoreductase; COG0702 Predicted nucleoside-diphosphate-sugar epimerases. (212 aa)    
Predicted Functional Partners:
ADZ06311.1
Polysaccharide biosynthesis protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
    0.550
ADZ06312.1
Oxidoreductase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.549
arcA
COG2235 Arginine deiminase.
   
    0.445
ADZ06314.1
COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen.
       0.434
ADZ06210.1
General stress response; Belongs to the UPF0337 (CsbD) family.
  
    0.426
ADZ07035.1
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
    0.426
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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