STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ06324.1Hypothetical protein; COG5438 Predicted multitransmembrane protein. (261 aa)    
Predicted Functional Partners:
ADZ06323.1
Hypothetical protein; COG5438 Predicted multitransmembrane protein.
 
    0.972
ADZ06325.1
COG0657 Esterase/lipase.
       0.776
ADZ06960.1
COG0285 Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.
   
    0.637
ADZ06322.1
Hypothetical protein; COG0789 Predicted transcriptional regulators.
 
     0.610
ddl
D-alanyl-alanine synthetase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
       0.473
ADZ07830.1
Cell surface protein; COG1376 Uncharacterized protein conserved in bacteria.
  
     0.462
ADZ06984.1
ADP-ribose pyrophosphatase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
   
    0.422
ADZ06631.1
Hypothetical protein.
 
     0.417
ADZ06280.1
COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
     0.414
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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