STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ06363.1Autolysin, amidase; COG5632 N-acetylmuramoyl-L-alanine amidase. (369 aa)    
Predicted Functional Partners:
ADZ06362.1
N-acetylmuramidase; COG1705 Muramidase (flagellum-specific).
   
0.818
ADZ06687.1
Surface exclusion protein.
 
   
 0.701
ADZ07395.1
COG0739 Membrane proteins related to metalloendopeptidases.
 
  
 0.682
ADZ07382.1
Hypothetical protein.
  
     0.668
ADZ07810.1
COG4473 Predicted ABC-type exoprotein transport system, permease component.
 
     0.610
ADZ07875.1
Hypothetical protein.
  
     0.595
ADZ07233.1
Hypothetical protein; COG3409 Putative peptidoglycan-binding domain-containing protein.
 
  
 0.589
ADZ07193.1
Hypothetical protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
 
  
 0.550
ADZ06364.1
Na+-H+ antiporter; COG0475 Kef-type K+ transport systems, membrane components.
       0.549
ADZ06396.1
Hypothetical protein.
 
     0.549
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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