STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ06420.1Hypothetical protein; COG3548 Predicted integral membrane protein. (179 aa)    
Predicted Functional Partners:
ADZ07982.1
Hypothetical protein; COG1357 Uncharacterized low-complexity proteins.
  
     0.629
ADZ06419.1
Transcriptional regulator raffinose operon; COG2207 AraC-type DNA-binding domain-containing proteins.
       0.554
ADZ07280.1
Hydrophobic protein.
 
     0.525
ADZ06418.1
COG4690 Dipeptidase.
       0.436
ADZ07701.1
Hypothetical protein; COG1680 Beta-lactamase class C and other penicillin binding proteins.
 
     0.422
ADZ06222.1
COG4905 Predicted membrane protein.
  
     0.409
ADZ07310.1
COG0531 Amino acid transporters.
 
     0.405
ADZ07348.1
Lysin; COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
  
     0.400
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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