Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ADZ06631.1 | ADZ06990.1 | LAC30SC_02240 | LAC30SC_04125 | Hypothetical protein. | COG0457 FOG: TPR repeat. | 0.645 |
| ADZ06631.1 | mprF | LAC30SC_02240 | LAC30SC_02300 | Hypothetical protein. | Integral membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. | 0.720 |
| ADZ06640.1 | ADZ06641.1 | LAC30SC_02290 | LAC30SC_02295 | COG0438 Glycosyltransferase. | COG0438 Glycosyltransferase. | 0.906 |
| ADZ06640.1 | ADZ06643.1 | LAC30SC_02290 | LAC30SC_02305 | COG0438 Glycosyltransferase. | Sulfatase; COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily. | 0.766 |
| ADZ06640.1 | mprF | LAC30SC_02290 | LAC30SC_02300 | COG0438 Glycosyltransferase. | Integral membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. | 0.911 |
| ADZ06641.1 | ADZ06640.1 | LAC30SC_02295 | LAC30SC_02290 | COG0438 Glycosyltransferase. | COG0438 Glycosyltransferase. | 0.906 |
| ADZ06641.1 | ADZ06643.1 | LAC30SC_02295 | LAC30SC_02305 | COG0438 Glycosyltransferase. | Sulfatase; COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily. | 0.779 |
| ADZ06641.1 | mprF | LAC30SC_02295 | LAC30SC_02300 | COG0438 Glycosyltransferase. | Integral membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. | 0.931 |
| ADZ06643.1 | ADZ06640.1 | LAC30SC_02305 | LAC30SC_02290 | Sulfatase; COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily. | COG0438 Glycosyltransferase. | 0.766 |
| ADZ06643.1 | ADZ06641.1 | LAC30SC_02305 | LAC30SC_02295 | Sulfatase; COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily. | COG0438 Glycosyltransferase. | 0.779 |
| ADZ06643.1 | mprF | LAC30SC_02305 | LAC30SC_02300 | Sulfatase; COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily. | Integral membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. | 0.781 |
| ADZ06921.1 | ADZ07370.1 | LAC30SC_03760 | LAC30SC_06200 | Hypothetical protein; COG4767 Glycopeptide antibiotics resistance protein. | COG5353 Uncharacterized protein conserved in bacteria. | 0.404 |
| ADZ06921.1 | mprF | LAC30SC_03760 | LAC30SC_02300 | Hypothetical protein; COG4767 Glycopeptide antibiotics resistance protein. | Integral membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. | 0.571 |
| ADZ06990.1 | ADZ06631.1 | LAC30SC_04125 | LAC30SC_02240 | COG0457 FOG: TPR repeat. | Hypothetical protein. | 0.645 |
| ADZ06990.1 | ADZ07370.1 | LAC30SC_04125 | LAC30SC_06200 | COG0457 FOG: TPR repeat. | COG5353 Uncharacterized protein conserved in bacteria. | 0.499 |
| ADZ06990.1 | mprF | LAC30SC_04125 | LAC30SC_02300 | COG0457 FOG: TPR repeat. | Integral membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. | 0.505 |
| ADZ07370.1 | ADZ06921.1 | LAC30SC_06200 | LAC30SC_03760 | COG5353 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG4767 Glycopeptide antibiotics resistance protein. | 0.404 |
| ADZ07370.1 | ADZ06990.1 | LAC30SC_06200 | LAC30SC_04125 | COG5353 Uncharacterized protein conserved in bacteria. | COG0457 FOG: TPR repeat. | 0.499 |
| ADZ07370.1 | ADZ07739.1 | LAC30SC_06200 | LAC30SC_08190 | COG5353 Uncharacterized protein conserved in bacteria. | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | 0.627 |
| ADZ07370.1 | mprF | LAC30SC_06200 | LAC30SC_02300 | COG5353 Uncharacterized protein conserved in bacteria. | Integral membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. | 0.534 |
page 1 of 2