STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ06669.1Biotin carboxylase; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component. (441 aa)    
Predicted Functional Partners:
ADZ06670.1
COG1201 Lhr-like helicases.
     0.989
ADZ06668.1
Hypothetical protein.
 
     0.960
ADZ07067.1
COG2011 ABC-type metal ion transport system, permease component.
  
 
 0.894
ADZ07065.1
Outer membrane lipoprotein precursor; COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; Belongs to the nlpA lipoprotein family.
  
 
 0.866
ADZ06671.1
Hypothetical protein.
       0.655
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
  
 0.516
ADZ07502.1
COG1897 Homoserine trans-succinylase; Belongs to the MetA family.
  
    0.500
ADZ06667.1
COG1866 Phosphoenolpyruvate carboxykinase (ATP).
       0.484
ADZ06672.1
NADPH-flavin oxidoreductase; COG0778 Nitroreductase; Belongs to the flavin oxidoreductase frp family.
       0.475
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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