STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ06686.1Agregation promoting protein. (228 aa)    
Predicted Functional Partners:
ADZ06280.1
COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
     0.567
ADZ06687.1
Surface exclusion protein.
 
     0.564
ADZ07421.1
COG3953 SLT domain proteins.
  
  
 0.493
ADZ07167.1
COG1376 Uncharacterized protein conserved in bacteria.
 
  
 0.478
ADZ07891.1
Mucus binding protein precursor Mub.
  
 
 0.477
ADZ07160.1
Trp repressor binding protein; COG0716 Flavodoxins.
  
  
 0.467
ADZ06766.1
Hypothetical protein.
  
  
 0.460
ADZ06906.1
Competence protein; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
   
   0.451
ADZ06907.1
Competence protein; COG1459 Type II secretory pathway, component PulF.
   
   0.451
ADZ08109.1
COG1376 Uncharacterized protein conserved in bacteria.
 
  
 0.432
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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