STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ06721.1Capsular polysaccharide synthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. (476 aa)    
Predicted Functional Partners:
ADZ06722.1
Glycosyltransferase; COG3774 Mannosyltransferase OCH1 and related enzymes.
 
  
 0.907
ADZ06720.1
Teichoic acid biosynthesis protein; COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC.
 
  
 0.877
ADZ07967.1
COG0562 UDP-galactopyranose mutase.
 
  
 0.796
ADZ06723.1
COG3091 Uncharacterized protein conserved in bacteria; Belongs to the SprT family.
       0.782
ADZ06716.1
Galactosyltransferase; COG0438 Glycosyltransferase.
 
  
 0.763
ADZ07974.1
Phospho-glucosyltransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.717
ADZ08000.1
Hypothetical protein.
  
     0.680
ADZ07966.1
Polysaccharide polymerase.
 
  
 0.647
gatC
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
  
    0.585
ADZ06719.1
Calcium-translocating P-type ATPase, PMCA-type; COG0474 Cation transport ATPase.
  
    0.558
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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