STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ06789.1COG0531 Amino acid transporters. (434 aa)    
Predicted Functional Partners:
ADZ06791.1
ATP-dependent RNA helicase, DEAD-DEAH box; COG0513 Superfamily II DNA and RNA helicases.
   
   0.599
ADZ06790.1
Hypothetical protein; COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
       0.560
ADZ06792.1
Cellobiose-specific PTS IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
       0.549
ADZ06437.1
Alpha,alpha-phosphotrehalase; COG0366 Glycosidases.
  
 0.485
ADZ06857.1
Amylopullulanase; COG0366 Glycosidases.
  
 0.485
ADZ07170.1
Trehalose 6-P hydrolase; COG0366 Glycosidases.
  
 0.485
gtfA
Sucrose phosphorylase; COG0366 Glycosidases.
  
 0.485
ADZ08128.1
Neopullulanase; COG0366 Glycosidases; Belongs to the glycosyl hydrolase 13 family.
  
 0.485
ADZ08129.1
Alpha,alpha-phosphotrehalase; COG0366 Glycosidases.
  
 0.485
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.