Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADZ06790.1Hypothetical protein; COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase). (235 aa)    
Predicted Functional Partners:
ADZ06791.1
ATP-dependent RNA helicase, DEAD-DEAH box; COG0513 Superfamily II DNA and RNA helicases.
       0.824
ADZ06792.1
Cellobiose-specific PTS IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
       0.773
ADZ07875.1
Hypothetical protein.
  
     0.679
ADZ06316.1
COG1309 Transcriptional regulator.
  
   
 0.641
ADZ06396.1
Hypothetical protein.
 
     0.637
ADZ06742.1
Hypothetical protein; COG1396 Predicted transcriptional regulators.
 
     0.637
ADZ07878.1
COG2367 Beta-lactamase class A.
 
     0.620
ADZ06789.1
COG0531 Amino acid transporters.
       0.551
ADZ06252.1
Phospho-beta-glycosidase; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
     0.509
ADZ06355.1
Hypothetical protein.
 
     0.501
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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