STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ06818.1COG4469 Competence protein. (286 aa)    
Predicted Functional Partners:
ADZ06817.1
Adaptor protein; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family.
       0.764
rexB
ATP-dependent exonuclease subunit B; ATP-dependent DNA helicase.
  
   
 0.689
ADZ07007.1
Competence protein ComEC; COG0658 Predicted membrane metal-binding protein.
 
  
 0.681
ADZ06322.1
Hypothetical protein; COG0789 Predicted transcriptional regulators.
  
     0.669
ADZ08093.1
Membrane anchor connecting MutS2 with cell-division Z-ring.
  
     0.663
ADZ06907.1
Competence protein; COG1459 Type II secretory pathway, component PulF.
  
    0.651
ADZ07810.1
COG4473 Predicted ABC-type exoprotein transport system, permease component.
 
     0.595
ADZ07773.1
COG3611 Replication initiation/membrane attachment protein.
  
     0.588
ADZ08000.1
Hypothetical protein.
  
     0.586
spxA
Putative arsenate reductase; Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development- promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress. Belongs to the ArsC family. Spx subfamily.
     
 0.574
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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