STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ06841.1Hypothetical protein. (220 aa)    
Predicted Functional Partners:
ADZ06843.1
Competence protein; COG1040 Predicted amidophosphoribosyltransferases.
  
    0.774
ADZ06842.1
COMF operon protein 1; COG4098 Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein).
     
 0.773
raiA
Phosphate starvation inducible protein stress related protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
     
 0.649
ADZ07879.1
CorA family cationic transporter; COG0598 Mg2+ and Co2+ transporters.
  
    0.458
ADZ07393.1
COG2384 Predicted SAM-dependent methyltransferase.
   
    0.443
ADZ07381.1
Nucleolar protein; COG0144 tRNA and rRNA cytosine-C5-methylases.
   
  
 0.422
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.419
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.