STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ06876.1HAD family phosphatase; COG0561 Predicted hydrolases of the HAD superfamily. (291 aa)    
Predicted Functional Partners:
ADZ06238.1
Hydrolase; COG0561 Predicted hydrolases of the HAD superfamily.
 
    0.779
ADZ06875.1
Hypothetical protein.
       0.763
ADZ07380.1
COG0561 Predicted hydrolases of the HAD superfamily.
 
    0.753
ADZ06777.1
COG1349 Transcriptional regulators of sugar metabolism.
 
    0.591
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
     
 0.580
tsaE
COG0802 Predicted ATPase or kinase.
       0.435
ADZ06857.1
Amylopullulanase; COG0366 Glycosidases.
  
    0.422
ADZ08128.1
Neopullulanase; COG0366 Glycosidases; Belongs to the glycosyl hydrolase 13 family.
  
    0.422
ADZ06874.1
COG3547 Transposase and inactivated derivatives.
       0.413
eutD
COG0280 Phosphotransacetylase.
       0.400
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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