STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potASpermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (365 aa)    
Predicted Functional Partners:
ADZ06886.1
Spermidine-putrescine ABC transporter permease protein; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 0.999
ADZ06887.1
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 
 0.999
ADZ06888.1
COG0687 Spermidine/putrescine-binding periplasmic protein.
 
 0.999
ADZ07811.1
ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
0.910
ADZ07574.1
COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
    
0.901
ADZ08084.1
COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
   
0.901
ADZ08085.1
COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
   
0.901
ADZ07545.1
COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
   
0.898
ADZ07201.1
COG1132 ABC-type multidrug transport system, ATPase and permease components.
   
0.838
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
  
  
 0.747
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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