STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ06900.1Hypothetical protein; COG1073 Hydrolases of the alpha/beta superfamily. (315 aa)    
Predicted Functional Partners:
ADZ06640.1
COG0438 Glycosyltransferase.
   
 
 0.555
ADZ06641.1
COG0438 Glycosyltransferase.
   
 
 0.555
ADZ06716.1
Galactosyltransferase; COG0438 Glycosyltransferase.
   
 
 0.555
ADZ07174.1
Type 1 capsular polysaccharide biosynthesis protein; COG0438 Glycosyltransferase.
   
 
 0.555
ADZ07966.1
Polysaccharide polymerase.
   
 
 0.555
ADZ07970.1
Glycosyltransferase Family 4 candidate a-glycosyltransferase; COG0438 Glycosyltransferase.
   
 
 0.555
ADZ07971.1
EpsIM, putative glycosyltransferase; COG0438 Glycosyltransferase.
   
 
 0.555
ADZ06899.1
COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; Belongs to the glycosyl hydrolase 1 family.
  
  
 0.499
pfkB
1-phosphofructokinase; COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
   
    0.474
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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