Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADZ06901.1 | ADZ06902.1 | LAC30SC_03660 | LAC30SC_03665 | COG0531 Amino acid transporters. | Hypothetical protein. | 0.456 |
ADZ06901.1 | ADZ06904.1 | LAC30SC_03660 | LAC30SC_03675 | COG0531 Amino acid transporters. | COG5652 Predicted integral membrane protein. | 0.425 |
ADZ06901.1 | rpsZ | LAC30SC_03660 | LAC30SC_03670 | COG0531 Amino acid transporters. | 30S ribosomal protein S14A; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.453 |
ADZ06902.1 | ADZ06901.1 | LAC30SC_03665 | LAC30SC_03660 | Hypothetical protein. | COG0531 Amino acid transporters. | 0.456 |
ADZ06902.1 | ADZ06904.1 | LAC30SC_03665 | LAC30SC_03675 | Hypothetical protein. | COG5652 Predicted integral membrane protein. | 0.490 |
ADZ06902.1 | rpsZ | LAC30SC_03665 | LAC30SC_03670 | Hypothetical protein. | 30S ribosomal protein S14A; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.768 |
ADZ06904.1 | ADZ06901.1 | LAC30SC_03675 | LAC30SC_03660 | COG5652 Predicted integral membrane protein. | COG0531 Amino acid transporters. | 0.425 |
ADZ06904.1 | ADZ06902.1 | LAC30SC_03675 | LAC30SC_03665 | COG5652 Predicted integral membrane protein. | Hypothetical protein. | 0.490 |
ADZ06904.1 | rpsZ | LAC30SC_03675 | LAC30SC_03670 | COG5652 Predicted integral membrane protein. | 30S ribosomal protein S14A; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.494 |
rpsZ | ADZ06901.1 | LAC30SC_03670 | LAC30SC_03660 | 30S ribosomal protein S14A; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | COG0531 Amino acid transporters. | 0.453 |
rpsZ | ADZ06902.1 | LAC30SC_03670 | LAC30SC_03665 | 30S ribosomal protein S14A; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | Hypothetical protein. | 0.768 |
rpsZ | ADZ06904.1 | LAC30SC_03670 | LAC30SC_03675 | 30S ribosomal protein S14A; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | COG5652 Predicted integral membrane protein. | 0.494 |