STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ06921.1Hypothetical protein; COG4767 Glycopeptide antibiotics resistance protein. (200 aa)    
Predicted Functional Partners:
ADZ06337.1
Hypothetical protein.
  
     0.766
ADZ06304.1
Hypothetical protein.
  
     0.725
ADZ06831.1
COG4835 Uncharacterized protein conserved in bacteria.
  
     0.713
ADZ06808.1
Hypothetical protein.
  
     0.637
ADZ06920.1
Alkaline phosphatase famliy; COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily.
       0.619
ADZ06338.1
Hypothetical protein.
  
     0.588
ADZ08098.1
COG1309 Transcriptional regulator.
  
     0.583
pgi
COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family.
       0.576
mprF
Integral membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
 
   
 0.571
ADZ06306.1
COG4814 Uncharacterized protein with an alpha/beta hydrolase fold.
  
     0.519
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.