STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ07058.1Hypothetical protein; COG0671 Membrane-associated phospholipid phosphatase. (191 aa)    
Predicted Functional Partners:
ADZ07878.1
COG2367 Beta-lactamase class A.
 
     0.596
ADZ07875.1
Hypothetical protein.
  
     0.567
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
   
 0.543
ADZ07059.1
Choloylglycine hydrolase; COG3049 Penicillin V acylase and related amidases.
       0.524
ADZ06316.1
COG1309 Transcriptional regulator.
 
     0.510
ADZ07606.1
V-type sodium ATP synthase subunit.
  
     0.496
ADZ06759.1
COG4721 Predicted membrane protein.
  
     0.471
ADZ06396.1
Hypothetical protein.
 
     0.469
ADZ06687.1
Surface exclusion protein.
 
    0.467
ADZ06965.1
COG2891 Cell shape-determining protein.
  
     0.464
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.