STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metNMethionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (353 aa)    
Predicted Functional Partners:
ADZ07065.1
Outer membrane lipoprotein precursor; COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; Belongs to the nlpA lipoprotein family.
 0.999
ADZ07067.1
COG2011 ABC-type metal ion transport system, permease component.
 0.999
ADZ06758.1
COG1132 ABC-type multidrug transport system, ATPase and permease components.
     
0.897
ADZ07545.1
COG1132 ABC-type multidrug transport system, ATPase and permease components.
     
0.891
ADZ06384.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  
 0.880
ADZ08084.1
COG1132 ABC-type multidrug transport system, ATPase and permease components.
     
0.832
ADZ08085.1
COG1132 ABC-type multidrug transport system, ATPase and permease components.
     
0.810
ADZ07913.1
COG0765 ABC-type amino acid transport system, permease component.
    
 0.751
ADZ07502.1
COG1897 Homoserine trans-succinylase; Belongs to the MetA family.
  
  
 0.661
ADZ07571.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  
 0.651
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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