STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ07154.1COG0531 Amino acid transporters. (490 aa)    
Predicted Functional Partners:
ADZ07155.1
COG1982 Arginine/lysine/ornithine decarboxylases.
 
  
 0.822
ADZ07156.1
Aluminum resistance protein; COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance.
 
     0.670
ADZ06835.1
3-oxoacyl-(acyl-carrier protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
   
 0.572
ADZ06437.1
Alpha,alpha-phosphotrehalase; COG0366 Glycosidases.
  
 0.485
ADZ06857.1
Amylopullulanase; COG0366 Glycosidases.
  
 0.485
ADZ07170.1
Trehalose 6-P hydrolase; COG0366 Glycosidases.
  
 0.485
gtfA
Sucrose phosphorylase; COG0366 Glycosidases.
  
 0.485
ADZ08128.1
Neopullulanase; COG0366 Glycosidases; Belongs to the glycosyl hydrolase 13 family.
  
 0.485
ADZ08129.1
Alpha,alpha-phosphotrehalase; COG0366 Glycosidases.
  
 0.485
ADZ07107.1
Hypothetical protein.
 
     0.438
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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