Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ADZ06393.1 | xerS | LAC30SC_01005 | LAC30SC_06105 | Hypothetical protein; Belongs to the SOS response-associated peptidase family. | Site-specific tyrosine recombinase XerS; COG0582 Integrase; Belongs to the 'phage' integrase family. | 0.432 |
| ADZ06843.1 | xerS | LAC30SC_03355 | LAC30SC_06105 | Competence protein; COG1040 Predicted amidophosphoribosyltransferases. | Site-specific tyrosine recombinase XerS; COG0582 Integrase; Belongs to the 'phage' integrase family. | 0.446 |
| hslU | hslV | LAC30SC_04955 | LAC30SC_04950 | ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.999 |
| hslU | topA | LAC30SC_04955 | LAC30SC_04935 | ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.872 |
| hslU | xerS | LAC30SC_04955 | LAC30SC_06105 | ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | Site-specific tyrosine recombinase XerS; COG0582 Integrase; Belongs to the 'phage' integrase family. | 0.486 |
| hslV | hslU | LAC30SC_04950 | LAC30SC_04955 | ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.999 |
| hslV | topA | LAC30SC_04950 | LAC30SC_04935 | ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.860 |
| hslV | xerS | LAC30SC_04950 | LAC30SC_06105 | ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | Site-specific tyrosine recombinase XerS; COG0582 Integrase; Belongs to the 'phage' integrase family. | 0.547 |
| pgk | xerS | LAC30SC_03495 | LAC30SC_06105 | COG0126 3-phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | Site-specific tyrosine recombinase XerS; COG0582 Integrase; Belongs to the 'phage' integrase family. | 0.420 |
| topA | hslU | LAC30SC_04935 | LAC30SC_04955 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.872 |
| topA | hslV | LAC30SC_04935 | LAC30SC_04950 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.860 |
| topA | xerS | LAC30SC_04935 | LAC30SC_06105 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | Site-specific tyrosine recombinase XerS; COG0582 Integrase; Belongs to the 'phage' integrase family. | 0.555 |
| whiA | xerS | LAC30SC_03460 | LAC30SC_06105 | Putative sporulation transcription regulator whiA; Involved in cell division and chromosome segregation. | Site-specific tyrosine recombinase XerS; COG0582 Integrase; Belongs to the 'phage' integrase family. | 0.428 |
| xerS | ADZ06393.1 | LAC30SC_06105 | LAC30SC_01005 | Site-specific tyrosine recombinase XerS; COG0582 Integrase; Belongs to the 'phage' integrase family. | Hypothetical protein; Belongs to the SOS response-associated peptidase family. | 0.432 |
| xerS | ADZ06843.1 | LAC30SC_06105 | LAC30SC_03355 | Site-specific tyrosine recombinase XerS; COG0582 Integrase; Belongs to the 'phage' integrase family. | Competence protein; COG1040 Predicted amidophosphoribosyltransferases. | 0.446 |
| xerS | hslU | LAC30SC_06105 | LAC30SC_04955 | Site-specific tyrosine recombinase XerS; COG0582 Integrase; Belongs to the 'phage' integrase family. | ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.486 |
| xerS | hslV | LAC30SC_06105 | LAC30SC_04950 | Site-specific tyrosine recombinase XerS; COG0582 Integrase; Belongs to the 'phage' integrase family. | ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.547 |
| xerS | pgk | LAC30SC_06105 | LAC30SC_03495 | Site-specific tyrosine recombinase XerS; COG0582 Integrase; Belongs to the 'phage' integrase family. | COG0126 3-phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.420 |
| xerS | topA | LAC30SC_06105 | LAC30SC_04935 | Site-specific tyrosine recombinase XerS; COG0582 Integrase; Belongs to the 'phage' integrase family. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.555 |
| xerS | whiA | LAC30SC_06105 | LAC30SC_03460 | Site-specific tyrosine recombinase XerS; COG0582 Integrase; Belongs to the 'phage' integrase family. | Putative sporulation transcription regulator whiA; Involved in cell division and chromosome segregation. | 0.428 |