STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ07506.1Hypothetical protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. (122 aa)    
Predicted Functional Partners:
ADZ06756.1
COG1846 Transcriptional regulators.
 
    0.637
ADZ07291.1
COG4334 Uncharacterized protein conserved in bacteria.
  
     0.623
ADZ07146.1
Integrase-recombinase; Belongs to the 'phage' integrase family.
 
     0.622
ADZ07387.1
Hypothetical protein.
  
     0.588
ADZ06957.1
Dolichyl-phosphate beta-D-mannosyltransferase; COG2246 Predicted membrane protein.
 
     0.573
ADZ07606.1
V-type sodium ATP synthase subunit.
  
     0.551
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
       0.538
ADZ07505.1
Hypothetical protein.
       0.535
ADZ06347.1
PAS domain S-box.
 
     0.496
ADZ08181.1
COG1396 Predicted transcriptional regulators.
 
    0.483
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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