STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ07539.1Hypothetical protein. (2124 aa)    
Predicted Functional Partners:
ADZ06511.1
Hypothetical protein; COG0582 Integrase; Belongs to the 'phage' integrase family.
 
     0.716
ADZ08133.1
ABC transporter ATP-binding and membrane spanning protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
     0.658
ADZ08202.1
Hypothetical protein; COG0531 Amino acid transporters.
 
    0.612
ADZ06515.1
Hypothetical protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
     0.543
ADZ08181.1
COG1396 Predicted transcriptional regulators.
 
     0.538
ADZ07423.1
COG5283 Phage-related tail protein.
  
     0.487
ADZ08048.1
COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
     0.466
ADZ06518.1
COG1002 Type II restriction enzyme, methylase subunits.
 
     0.454
ADZ07540.1
Hypothetical protein.
       0.449
ADZ07541.1
COG3436 Transposase and inactivated derivatives.
       0.449
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.