STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ07574.1COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily. (342 aa)    
Predicted Functional Partners:
ADZ07571.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.999
ADZ07572.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 0.998
ADZ07573.1
Oligopeptide ABC transporter ATP-binding protein; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
0.992
ADZ06384.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.988
ADZ07570.1
Oligopeptide ABC transporter substrate; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
 
 0.987
ADZ07569.1
Oligopeptide ABC trasporter substrate binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
 
 0.984
ADZ07677.1
Oligopeptide ABC trasporter substrate binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
 
 0.979
ADZ06383.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.931
potA
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
    
0.901
ADZ06386.1
COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
  
0.670
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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