STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ07610.1COG1073 Hydrolases of the alpha/beta superfamily. (279 aa)    
Predicted Functional Partners:
ADZ07609.1
Aminoglycoside 3'-phosphotransferase.
       0.640
ADZ07608.1
COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog.
       0.519
ADZ06583.1
PTS system, sucrose-specific IIABC component; COG1264 Phosphotransferase system IIB components.
   
 
 0.482
ADZ07720.1
Lactose permease; COG2211 Na+/melibiose symporter and related transporters.
   
 
 0.472
ADZ07611.1
Lysin; COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
       0.464
ADZ06784.1
PTS enzyme II, ABC component; COG2190 Phosphotransferase system IIA components.
   
 
 0.463
ADZ07613.1
Lipase; COG0657 Esterase/lipase.
 
   
 0.441
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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