STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ07611.1Lysin; COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase). (409 aa)    
Predicted Functional Partners:
ADZ06833.1
Protease; COG0612 Predicted Zn-dependent peptidases.
 
     0.584
ADZ06947.1
Hypothetical protein.
  
     0.570
ADZ07613.1
Lipase; COG0657 Esterase/lipase.
 
     0.522
ADZ07395.1
COG0739 Membrane proteins related to metalloendopeptidases.
 
     0.503
ADZ07492.1
Hypothetical protein; COG0583 Transcriptional regulator.
  
     0.488
ADZ07800.1
Bacteriocin helveticin J.
 
     0.488
ADZ06782.1
COG1737 Transcriptional regulators.
 
     0.479
ADZ07549.1
Acyl-coa thioesterase; COG2755 Lysophospholipase L1 and related esterases.
 
     0.477
ADZ07146.1
Integrase-recombinase; Belongs to the 'phage' integrase family.
 
    0.465
ADZ07610.1
COG1073 Hydrolases of the alpha/beta superfamily.
       0.464
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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