Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADZ07289.1 | ADZ07718.1 | LAC30SC_05725 | LAC30SC_08085 | Hypothetical protein; COG0346 Lactoylglutathione lyase and related lyases. | COG0778 Nitroreductase. | 0.458 |
ADZ07289.1 | tadA | LAC30SC_05725 | LAC30SC_01870 | Hypothetical protein; COG0346 Lactoylglutathione lyase and related lyases. | Cytidine-deoxycytidylate deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.478 |
ADZ07717.1 | ADZ07718.1 | LAC30SC_08080 | LAC30SC_08085 | Transcriptional regulator, gntR family protein; COG2188 Transcriptional regulators. | COG0778 Nitroreductase. | 0.477 |
ADZ07718.1 | ADZ07289.1 | LAC30SC_08085 | LAC30SC_05725 | COG0778 Nitroreductase. | Hypothetical protein; COG0346 Lactoylglutathione lyase and related lyases. | 0.458 |
ADZ07718.1 | ADZ07717.1 | LAC30SC_08085 | LAC30SC_08080 | COG0778 Nitroreductase. | Transcriptional regulator, gntR family protein; COG2188 Transcriptional regulators. | 0.477 |
ADZ07718.1 | tadA | LAC30SC_08085 | LAC30SC_01870 | COG0778 Nitroreductase. | Cytidine-deoxycytidylate deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.452 |
tadA | ADZ07289.1 | LAC30SC_01870 | LAC30SC_05725 | Cytidine-deoxycytidylate deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | Hypothetical protein; COG0346 Lactoylglutathione lyase and related lyases. | 0.478 |
tadA | ADZ07718.1 | LAC30SC_01870 | LAC30SC_08085 | Cytidine-deoxycytidylate deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | COG0778 Nitroreductase. | 0.452 |