STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ07800.1Bacteriocin helveticin J. (325 aa)    
Predicted Functional Partners:
ADZ07799.1
DNA-damage-inducible protein.
 
     0.788
ADZ07875.1
Hypothetical protein.
  
     0.727
ADZ07878.1
COG2367 Beta-lactamase class A.
  
     0.681
ADZ07606.1
V-type sodium ATP synthase subunit.
  
     0.673
ADZ07387.1
Hypothetical protein.
  
     0.657
ADZ07388.1
Hypothetical protein.
  
     0.657
ADZ06396.1
Hypothetical protein.
  
     0.646
ADZ07382.1
Hypothetical protein.
  
     0.624
ADZ07801.1
COG0308 Aminopeptidase N.
 
     0.605
ADZ06687.1
Surface exclusion protein.
  
     0.602
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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