STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ07853.1Hypothetical protein; COG1396 Predicted transcriptional regulators. (270 aa)    
Predicted Functional Partners:
ADZ08116.1
COG0477 Permeases of the major facilitator superfamily.
 
   
 0.725
ADZ07204.1
COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
     0.658
ADZ07852.1
COG1846 Transcriptional regulators.
  
 
 0.567
ADZ07896.1
COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
     0.552
ADZ06553.1
Receptor; COG0679 Predicted permeases.
 
     0.509
ADZ06756.1
COG1846 Transcriptional regulators.
 
 
 0.504
ADZ06917.1
COG5658 Predicted integral membrane protein.
  
     0.464
ADZ08180.1
COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
     0.459
ADZ08000.1
Hypothetical protein.
  
     0.448
ADZ06295.1
Hypothetical protein; COG1403 Restriction endonuclease.
 
  
 0.436
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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