STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ07881.1Hypothetical protein; COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily. (431 aa)    
Predicted Functional Partners:
ADZ07883.1
COG1175 ABC-type sugar transport systems, permease components.
 
     0.928
ADZ07884.1
Multiple sugar-binding ABC-transporter ATPase protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
     0.917
ADZ07880.1
Glycerol-3-phosphate ABC transporter; COG1653 ABC-type sugar transport system, periplasmic component.
 
     0.916
ADZ07882.1
COG0395 ABC-type sugar transport system, permease component.
 
     0.913
rnj
Metallo-b-lactamase superfamily protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
     
 0.908
rnj-2
Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
     
 0.908
ADZ06768.1
Glycerol-3-phosphate ABC transporter; COG1653 ABC-type sugar transport system, periplasmic component.
 
     0.790
ADZ06917.1
COG5658 Predicted integral membrane protein.
 
     0.663
rny
Phosphodiesterase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
  
 
 0.649
ADZ07888.1
COG0846 NAD-dependent protein deacetylases, SIR2 family.
 
 
   0.606
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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