STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ07893.1Putative surface protein. (665 aa)    
Predicted Functional Partners:
pyk
COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
  
    0.910
ADZ08069.1
COG1266 Predicted metal-dependent membrane protease.
  
     0.772
ADZ06296.1
COG3152 Predicted membrane protein.
  
    0.753
ADZ07891.1
Mucus binding protein precursor Mub.
 
   
 0.666
ADZ07894.1
Hypothetical protein.
     
 0.646
ADZ07344.1
Macrolide efflux protein; COG0477 Permeases of the major facilitator superfamily.
 
     0.640
ADZ07982.1
Hypothetical protein; COG1357 Uncharacterized low-complexity proteins.
 
  
 0.621
ADZ07280.1
Hydrophobic protein.
  
     0.551
ADZ07801.1
COG0308 Aminopeptidase N.
  
     0.537
ADZ08062.1
Histidine kinase; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
    0.489
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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