STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ07895.1Hypothetical protein. (247 aa)    
Predicted Functional Partners:
ADZ08097.1
Oxidoreductase; COG0431 Predicted flavoprotein.
    0.953
ADZ08096.1
Oxidoreductase; COG0431 Predicted flavoprotein.
    0.941
ADZ08094.1
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
     0.618
ADZ06958.1
COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
 
    0.513
ADZ06250.1
COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
 
    0.506
ADZ07896.1
COG1132 ABC-type multidrug transport system, ATPase and permease components.
       0.456
ADZ07894.1
Hypothetical protein.
      
 0.424
ADZ07868.1
Regulator; COG1396 Predicted transcriptional regulators.
 
     0.403
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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