STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ07898.1COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (233 aa)    
Predicted Functional Partners:
ADZ07899.1
Sensor protein; COG0642 Signal transduction histidine kinase.
 
 0.979
ADZ07754.1
Sensor protein; COG0642 Signal transduction histidine kinase.
 
 0.913
ADZ06919.1
Histidine kinase; COG0642 Signal transduction histidine kinase.
 
 0.893
ADZ08082.1
Sensor protein; COG0642 Signal transduction histidine kinase.
 
 0.874
ADZ07628.1
Sensor protein; COG0642 Signal transduction histidine kinase.
 
 0.814
walK
COG5002 Signal transduction histidine kinase.
 
 0.802
ADZ07900.1
COG3212 Predicted membrane protein.
 
  
 0.635
ADZ07897.1
Prolyl aminopeptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.
  
    0.624
ADZ07695.1
Sensor protein.
  
 
 0.618
ADZ07901.1
COG3212 Predicted membrane protein.
 
  
 0.581
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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