Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADZ07915.1Hypothetical protein; COG5549 Predicted Zn-dependent protease. (228 aa)    
Predicted Functional Partners:
ADZ08159.1
Cellobiose-specific PTS IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
     0.600
ADZ07395.1
COG0739 Membrane proteins related to metalloendopeptidases.
 
     0.587
ADZ07916.1
Phosphoglycerate mutase; COG0406 Fructose-2,6-bisphosphatase.
       0.584
ADZ08109.1
COG1376 Uncharacterized protein conserved in bacteria.
  
     0.570
ADZ07167.1
COG1376 Uncharacterized protein conserved in bacteria.
  
     0.532
ADZ07914.1
COG3973 Superfamily I DNA and RNA helicases.
       0.522
ADZ07878.1
COG2367 Beta-lactamase class A.
  
     0.509
ADZ06355.1
Hypothetical protein.
  
     0.505
ADZ07053.1
Hypothetical protein.
  
     0.484
ADZ07874.1
Surface protein.
  
     0.456
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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