STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ07965.1Polysaccharide transporter, pst family protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. (475 aa)    
Predicted Functional Partners:
ADZ07967.1
COG0562 UDP-galactopyranose mutase.
 
  
 0.956
ADZ07966.1
Polysaccharide polymerase.
 
  
 0.944
ADZ07974.1
Phospho-glucosyltransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.895
ADZ07970.1
Glycosyltransferase Family 4 candidate a-glycosyltransferase; COG0438 Glycosyltransferase.
  
  
 0.807
ADZ07968.1
Glycosyltransferase-like protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
 0.803
ADZ07969.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
 0.789
ADZ07971.1
EpsIM, putative glycosyltransferase; COG0438 Glycosyltransferase.
  
  
 0.785
ADZ07977.1
COG3944 Capsular polysaccharide biosynthesis protein.
 
  
 0.686
ADZ07976.1
Exopolysaccharide biosynthesis protein; COG0489 ATPases involved in chromosome partitioning.
 
  
 0.660
ADZ07972.1
Glycosyl transferase family protein.
     
 0.657
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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