STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ07980.1Hypothetical protein. (334 aa)    
Predicted Functional Partners:
hflX
GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
       0.782
ADZ06414.1
Hypothetical protein.
 
     0.755
ADZ08174.1
Hypothetical protein.
  
     0.710
ADZ06338.1
Hypothetical protein.
 
  
 0.635
ADZ06990.1
COG0457 FOG: TPR repeat.
 
    0.623
ADZ06529.1
2',3'-cyclic nucleotide; COG4639 Predicted kinase.
  
     0.596
ADZ08000.1
Hypothetical protein.
  
     0.596
ADZ06316.1
COG1309 Transcriptional regulator.
  
     0.556
ADZ06965.1
COG2891 Cell shape-determining protein.
  
     0.538
ADZ07909.1
Arylesterase; COG2755 Lysophospholipase L1 and related esterases.
 
    0.529
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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