STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08006.1Abortive infection protein; COG1266 Predicted metal-dependent membrane protease. (276 aa)    
Predicted Functional Partners:
ADZ08007.1
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
       0.570
ADZ08067.1
COG1266 Predicted metal-dependent membrane protease.
 
     0.491
ADZ08005.1
Hypothetical protein; COG1373 Predicted ATPase (AAA+ superfamily).
       0.465
ADZ08048.1
COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
     
 0.456
ADZ06291.1
COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
 
    0.445
ADZ06292.1
Beta-glucanase precursor; COG3405 Endoglucanase Y; Belongs to the glycosyl hydrolase 8 (cellulase D) family.
  
     0.439
ADZ06230.1
Sugar transporter; COG0477 Permeases of the major facilitator superfamily.
 
     0.436
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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