STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08061.1COG3279 Response regulator of the LytR/AlgR family. (266 aa)    
Predicted Functional Partners:
ADZ08062.1
Histidine kinase; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
  
 0.987
ADZ08063.1
Hypothetical protein.
       0.773
ADZ06296.1
COG3152 Predicted membrane protein.
  
     0.609
ADZ08048.1
COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
   
 0.533
ADZ08064.1
Hypothetical protein.
       0.500
ADZ07891.1
Mucus binding protein precursor Mub.
 
     0.449
ADZ08065.1
Hypothetical protein.
       0.440
ADZ06825.1
Hypothetical protein.
 
     0.437
ADZ07490.1
Hypothetical protein.
 
     0.424
ADZ07893.1
Putative surface protein.
 
     0.422
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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