STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ08186.1ABC transporter ATP binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component. (779 aa)    
Predicted Functional Partners:
ADZ08161.1
ABC transporter permease protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 
 0.771
ADZ08185.1
Hypothetical protein.
     
 0.727
ADZ08102.1
ABC transporter permease protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
 
 0.718
ADZ08160.1
ABC transporter ATPase protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 
0.713
ADZ07918.1
ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 
0.704
ADZ08101.1
ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 
0.700
ADZ06367.1
Hypothetical protein.
  
 
 0.690
ADZ07917.1
ABC transporter permease protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
 
 0.689
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
     
 0.676
ADZ07007.1
Competence protein ComEC; COG0658 Predicted membrane metal-binding protein.
 
     0.651
Your Current Organism:
Lactobacillus amylovorus
NCBI taxonomy Id: 1604
Other names: ATCC 33620, CCUG 27201, CIP 102989, DSM 16698 [[Lactobacillus sobrius]], DSM 20531, L. amylovorus, LMG 9496, LMG:9496, Lactobacillus acidophilus group A3, Lactobacillus sobrius, Lactobacillus sobrius Konstantinov et al. 2006, NCAIM B.01458, NCCB 100067 [[Lactobacillus sobrius]], NRRL B-4540, strain OTU171-001 [[Lactobacillus sobrius]]
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