STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALG81293.1Hypothetical protein. (56 aa)    
Predicted Functional Partners:
ALG81294.1
Carboxypeptidase Taq; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.
       0.612
argE1
Acetylornithine deacetylase.
       0.537
Your Current Organism:
Halanaeroarchaeum sulfurireducens
NCBI taxonomy Id: 1604004
Other names: H. sulfurireducens, Halanaeroarchaeum sulfurireducens Sorokin et al. 2016, Halobacteriaceae archaeon HSR2, Halobacteriaceae archaeon HSR3, Halobacteriaceae archaeon HSR4, Halobacteriaceae archaeon HSR5, Halobacteriaceae archaeon HSR7, Halobacteriaceae archaeon M27-SA2, JCM 30661, UNIQEM U935, strain HSR2
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