STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIP93182.1Iron-regulated ABC transporter membrane component SufB. (488 aa)    
Predicted Functional Partners:
SIP93112.1
Iron-regulated ABC transporter permease protein SufD.
 
 
0.999
SIP93145.1
Iron-regulated ABC transporter ATPase subunit SufC.
 
 0.999
SIP93073.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.990
SIP93221.1
Transcriptional regulator, BadM/Rrf2 family.
 
   
 0.901
SIQ88129.1
Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family.
  
 
 0.825
SIQ97238.1
Cysteine desulfuration protein SufE.
 
   0.801
SIQ55256.1
Probable FeS assembly SUF system protein SufT.
 
   
 0.723
SIP93001.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit.
       0.710
SIP93039.1
Ribosomal protein S18 acetylase RimI.
       0.694
SIQ18580.1
Monothiol glutaredoxin.
  
 
 0.645
Your Current Organism:
Lysobacter tolerans
NCBI taxonomy Id: 1604334
Other names: DSM 28473, KCTC 42936, L. tolerans, Luteimonas sp. UM1, Luteimonas tolerans, Luteimonas tolerans Rani et al. 2016, Lysobacter tolerans (Rani et al. 2016) Margesin et al. 2018, MCC 2572, strain UM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.